PHATRDRAFT_20143 acyl-synthetase long-chain family member 4 (AFD_class_I superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_20143 chr_7 acyl-synthetase long-chain family member 4 (AFD_class_I superfamily) 962343 964843 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0062
 0.39

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AFD_class_I superfamily Adenylate forming domain, Class I; This family includes acyl- and aryl-CoA ligases, as well as the... - 576.035 0 111 - 715 superfamily 266508
PLN02387 long-chain-fatty-acid-CoA ligase family protein - 440.708 3.75E-144 56 - 717 multi-dom 215217

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
13156 Not available 173378 322429 353558 Not available AT2G04350.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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