PHATRDRAFT_12294 (Rotamase)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12294	chr_8	(Rotamase)	116952	117230	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0123

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0064	0.31	77 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Rotamase		PPIC-type PPIASE domain; Rotamases increase the rate of protein folding by catalyzing the...	cl08278	85.0276	9.51E-23	5 - 88	specific	250020
Rotamase_2 superfamily		PPIC-type PPIASE domain; PPIC-type PPIASE domain.	-	85.0276	9.51E-23	5 - 88	superfamily	263564

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3435		Not available	180616	301259	75941	Not available	Not available	353613

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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