PHATRDRAFT_45802 (HECTc superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45802 chr_8 (HECTc superfamily) 321695 329866 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0319

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0055
 0.36

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SPRY SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit... cl02614 69.7516 2.45E-13 247 - 374 specific 240451
SPRY superfamily SPRY domain; SPRY domains, first identified in the SP1A kinase of Dictyostelium and rabbit... - 69.7516 2.45E-13 247 - 374 superfamily 261372
HECTc superfamily HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... - 76.8348 1.08E-14 2270 - 2444 superfamily 260176

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 260734 151332 433216 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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