PHATRDRAFT_12313 glycosyl hydrolase family 3 c terminal domain containingexpressed (Glyco_hydro_3 superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12313	chr_8	glycosyl hydrolase family 3 c terminal domain containingexpressed (Glyco_hydro_3 superfamily)	481246	483060	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0178

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0061	0.31	0.000015 1500

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Glyco_hydro_3 superfamily		Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 N terminal domain.	-	173.645	3.69E-49	28 - 332	superfamily	263517
Glyco_hydro_3_C		Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be...	cl08459	130.52	9.74E-35	373 - 603	specific	250964
Glyco_hydro_3_C superfamily		Glycosyl hydrolase family 3 C-terminal domain; This domain is involved in catalysis and may be...	-	130.52	9.74E-35	373 - 603	superfamily	263668

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	136431	228775	447998	Cre03.g200655.t1.1	AT5G64570.1	247721

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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