PHATRDRAFT_45904 pepsinogen a (pepsin_like)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45904 chr_8 pepsinogen a (pepsin_like) 619901 621733 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0052

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0199
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH; Pepsin-... cl11403 217.678 1.23E-65 84 - 449 specific 133138
pepsin_retropepsin_like superfamily Cellular and retroviral pepsin-like aspartate proteases; This family includes both cellular and... - 217.678 1.23E-65 84 - 449 superfamily 264354
Asp Eukaryotic aspartyl protease; Aspartyl (acid) proteases include pepsins, cathepsins, and renins.... - 199.823 1.43E-58 86 - 449 multi-dom 249520

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 236359 149087 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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