PHATRDRAFT_45987 (Bromodomain)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_45987 chr_8 (Bromodomain) 866621 873808 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0038

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0249
 0.32

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Bromodomain Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... cl02556 62.0046 5.24E-11 1271 - 1381 specific 99922
Bromodomain superfamily Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone... - 62.0046 5.24E-11 1271 - 1381 superfamily 261339
PHD PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... cl17445 42.0968 0.000131048 1409 - 1450 specific 250011
PHD superfamily PHD-finger; PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner... - 42.0968 0.000131048 1409 - 1450 superfamily 266687
rRNA_processing superfamily rRNA processing; This is a family of proteins that are involved in rRNA processing. In a... - 41.7981 0.000330496 679 - 786 superfamily 254853
FYRN superfamily F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is... - 39.8831 0.00076367 209 - 264 superfamily 261390

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23207 Not available 268128 258615 Not available Not available Not available 563445

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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