PHATRDRAFT_45998 proteasomealpha type 1 (proteasome_alpha_type_1)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45998	chr_8	proteasomealpha type 1 (proteasome_alpha_type_1)	917836	920182	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0059

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0155	0.23	64 68000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
proteasome_alpha_type_1		proteasome_alpha_type_1. The 20S proteasome, multisubunit proteolytic complex, is the central...	cl00467	344.659	2.72E-120	6 - 218	specific	239718
Ntn_hydrolase superfamily		The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are...	-	344.659	2.72E-120	6 - 218	superfamily	260443
PRE1		20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,...	-	198.291	1.24E-62	4 - 237	multi-dom	223711

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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