PHATRDRAFT_46012 (U3snoRNP10)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_46012	chr_8	(U3snoRNP10)	956196	962885	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0244

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0152	0.19	3600 5100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
U3snoRNP10 superfamily		U3 small nucleolar RNA-associated protein 10; This domain family is found in eukaryotes, and is...	-	50.2465	5.01E-07	271 - 408	superfamily	257024
U3snoRNP10 superfamily		U3 small nucleolar RNA-associated protein 10; This domain family is found in eukaryotes, and is...	-	50.2465	5.01E-07	271 - 408	superfamily	257024
BP28CT superfamily		BP28CT (NUC211) domain; This C terminal domain is found in BAP28-like nucleolar proteins.	-	49.5948	1.07E-06	1941 - 2024	superfamily	263110

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
35194		Not available	155072	260091	Not available	Not available	AT3G06530.2	251133

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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