PHATRDRAFT_12820 calcium-dependent protein kinase (S_TKc)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12820	chr_9	calcium-dependent protein kinase (S_TKc)	276515	277723	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0308

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0244	0.33	0.000093 160

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	52.5501	4.95E-09	263 - 321	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	52.5501	4.95E-09	263 - 321	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	52.5501	4.95E-09	263 - 321	superfamily	238008
EFh superfamily		EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal...	-	52.5501	4.95E-09	263 - 321	superfamily	238008
PKc_like superfamily		Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the...	-	177.69	1.70E-52	1 - 206	superfamily	263920
PTZ00184		calmodulin; Provisional	-	69.405	2.98E-14	259 - 390	multi-dom	185504
S_TKc		Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-...	-	222.405	1.26E-69	1 - 214	multi-dom	214567

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments