PHATRDRAFT_12877 ring finger and chy zinc finger domain containing 1 (zf-CHY)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12877 chr_9 ring finger and chy zinc finger domain containing 1 (zf-CHY) 671223 672121 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0350

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0018
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CHY CHY zinc finger; This family of domains are likely to bind to zinc ions. They contain many... cl19861 61.1815 6.35E-13 1 - 77 specific 253220
zf-CHY superfamily CHY zinc finger; This family of domains are likely to bind to zinc ions. They contain many... - 61.1815 6.35E-13 1 - 77 superfamily 268214
zinc_ribbon_6 superfamily Zinc-ribbon; This is a typical zinc-ribbon finger, with each pair of zinc-ligands coming from more-... - 53.3108 4.28E-10 179 - 234 superfamily 258737
zf-RING_2 Ring finger domain; Ring finger domain. cl17238 34.2844 0.00298842 126 - 170 specific 257949
RING superfamily RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60... - 34.2844 0.00298842 126 - 170 superfamily 266579

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
33603 Not available 198429 182844 Not available Cre17.g718300.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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