PHATRDRAFT_44963
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44963 chr_5 809453 811085 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0351

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0109
 0.44

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HLH Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors... cl00081 40.2751 7.54E-05 190 - 245 specific 238036
HLH superfamily Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors... - 40.2751 7.54E-05 190 - 245 superfamily 260178
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 36.4572 0.00200608 313 - 364 superfamily 238075
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 36.4572 0.00200608 313 - 364 superfamily 238075
PAS PAS fold; The PAS fold corresponds to the structural domain that has previously been defined as PAS... - 38.5341 0.000434177 299 - 415 multi-dom 250275

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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