20014 TBCAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20014	chr_13	TBCA	361971	362348	-	TBCA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7453016	Thaps20014.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0218

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0137	0.33	130 41

Most Highly Correlated Transcripts

270222 0.9418	plastid_psb28 0.9076	261228 Robl_LC7 0.907	5701 hypothetical protein 0.903	3204 hypothetical protein 0.901	1871 hypothetical protein 0.9002
6093 hypothetical protein 0.8998	17582 HAD-SF-IIA-hyp3 0.8982	7588 hypothetical protein 0.897	6960 Methyltransf_31 0.8901

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TBCA superfamily		Tubulin binding cofactor A; Tubulin binding cofactor A.	-	74.1979	3.33E-18	1 - 72	superfamily	251648
TBCA superfamily		Tubulin binding cofactor A; Tubulin binding cofactor A.	-	74.1979	3.33E-18	1 - 72	superfamily	251648

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_17048	PHATRDRAFT_17048	238992	176596	Not available	Not available	AT2G30410.2	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0007022 GO:0051082 -

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