PHATRDRAFT_45142 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45142	chr_6		309632	312391	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0212

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0110	0.50	21000 23000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
BRLZ		basic region leucin zipper; basic region leucin zipper.	cl02576	41.0104	0.000109881	196 - 233	specific	197664
B_zip1 superfamily		basic leucine zipper DNA-binding and multimerization region of GCN4 and related proteins; Basic...	-	41.0104	0.000109881	196 - 233	superfamily	261357
PAS_9		PAS domain; PAS domain.	-	40.0591	0.000303662	753 - 854	multi-dom	257751

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
24507		Not available	166143	253783	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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