PHATRDRAFT_44532 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_44532	chr_4		821697	825673	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0334

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0023	0.40

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SEC14		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	cl15787	48.5354	1.25E-06	1207 - 1286	specific	238099
SEC14 superfamily		Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae...	-	48.5354	1.25E-06	1207 - 1286	superfamily	265785
DUF1336 superfamily		Protein of unknown function (DUF1336); This family represents the C-terminus (approximately 250...	-	43.8342	9.21E-05	612 - 840	superfamily	254039

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4445		Not available	249352	234503	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments