PHATRDRAFT_43862 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_43862	chr_3		249295	251193	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0294

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0233	0.25	0.0000004 180

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	36.9779	0.00305211	256 - 352	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	36.9779	0.00305211	256 - 352	superfamily	238125
ANK superfamily		ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of...	-	36.9779	0.00305211	256 - 352	superfamily	238125
Arp		FOG: Ankyrin repeat [General function prediction only]	-	37.4963	0.00666643	284 - 352	multi-dom	223738

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	271218	290361	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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