PHATRDRAFT_50270 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50270	chr_28		150758	154717	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0228

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
C2		C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-...	cl14603	37.8167	0.00275646	407 - 510	specific	175973
C2 superfamily		C2 domain; The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-...	-	37.8167	0.00275646	407 - 510	superfamily	265430
PRT_C superfamily		Plant phosphoribosyltransferase C-terminal; This domain is found at the C-terminus of...	-	38.0094	0.00377061	1110 - 1169	superfamily	192017

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
3630		Not available	Not available	Not available	457875	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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