PHATRDRAFT_44962
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44962 chr_5 806933 808518 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0351

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0151
 0.34

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HLH Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors... cl00081 42.2011 2.25E-05 232 - 288 specific 238036
HLH superfamily Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors... - 42.2011 2.25E-05 232 - 288 superfamily 260178
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 35.6868 0.00379187 363 - 389 superfamily 238075
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 35.6868 0.00379187 363 - 389 superfamily 238075
PAS_9 PAS domain; PAS domain. - 38.1331 0.000649455 358 - 389 multi-dom 257751

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
24007 Not available 204663 26622 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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