PHATRDRAFT_49881 Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_49881	chr_25		178007	179466	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0214

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0160	0.36	0.0018 3.3

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Kelch		Kelch domain; Kelch domain.	cl02701	42.1603	1.48E-05	245 - 293	specific	128874
Kelch_3 superfamily		Galactose oxidase, central domain; Galactose oxidase, central domain.	-	35.7281	0.00256807	69 - 132	superfamily	261412
Kelch_3		Galactose oxidase, central domain; Galactose oxidase, central domain.	cl02701	35.7281	0.00256807	69 - 132	specific	257740
Kelch_3 superfamily		Galactose oxidase, central domain; Galactose oxidase, central domain.	-	35.7281	0.00256807	69 - 132	superfamily	261412

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
5851		Not available	182058	27307	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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