204 ATPase-IIA1_Ca
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
204 chr_1 ATPase-IIA1_Ca 1958115 1961513 - ATPase-IIA1_Ca

Synonyms

NCBI ID Ensembl Genomes exon ID
7443153 Thaps204.2, Thaps204.1, Thaps204.3, Thaps204.4, Thaps204.5

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0200

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0042
 0.43

Most Highly Correlated Transcripts

bd1662

(bd1662) TIGR00367
0.902

bd176

(bd176) PP2Cc
0.851

bd1150

(bd1150) PLN02433
0.8342

262610

ADPRase_NUDT5
0.8329

37976

cyclophilin_ABH_like
0.8277

9467

hypothetical protein
0.8213

bd911

(bd911) GH18_chitinase-like superfamily
0.8187

3154

(Tp_HSF_1b) HSF_DNA-bind
0.8135

1553

PKc_like superfamily
0.8132

bd463

(bd463) Aa_trans superfamily
0.8006

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 178.917 1.35E-50 115 - 356 superfamily 249606
E1-E2_ATPase superfamily E1-E2 ATPase; E1-E2 ATPase. - 178.917 1.35E-50 115 - 356 superfamily 249606
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 172.416 5.67E-49 778 - 993 superfamily 250058
Cation_ATPase_C superfamily Cation transporting ATPase, C-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 172.416 5.67E-49 778 - 993 superfamily 250058
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 90.3656 2.97E-21 427 - 509 superfamily 257602
Hydrolase_like2 superfamily Putative hydrolase of sodium-potassium ATPase alpha subunit; This is a putative hydrolase of the... - 90.3656 2.97E-21 427 - 509 superfamily 257602
Cation_ATPase_N Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... cl02930 72.571 3.22E-15 14 - 73 specific 250059
Cation_ATPase_N superfamily Cation transporter/ATPase, N-terminus; Members of this families are involved in Na+/K+, H+/K+, Ca... - 72.571 3.22E-15 14 - 73 superfamily 261517
ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase; This model describes the P-type... - 1163.01 0 62 - 995 multi-dom 233277

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0006812 GO:0015662 GO:0016020 GO:0005388 GO:0006816 GO:0016021 GO:0003824 GO:0008152 GO:0016820 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015662

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate.
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005388

calcium-transporting ATPase activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans).
GO Category: 
MF

GO:0006816

calcium ion transport

Details: 
The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016820

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Details: 
Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane.
GO Category: 
MF

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