10440 TBCCThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10440	chr_16a	TBCC	357507	359214	-	TBCC

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442536	Thaps10440.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0399

Most Highly Correlated Transcripts

14315 FAD_binding_7 0.8884	4565 hypothetical protein 0.8874	4482 hypothetical protein 0.885	21986 hypothetical protein 0.8816	10523 hypothetical protein 0.875	25655 hypothetical protein 0.8697
9111 hypothetical protein 0.8692	bd643 (bd643) NA 0.8669	22804 Delta6-FADS-like 0.8637	20292 DPM3 superfamily 0.8631

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TBCC		Tubulin binding cofactor C; Members of this family are involved in the folding pathway of tubulins...	-	95.7619	1.92E-23	391 - 508	multi-dom	254564

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	AT4G39920.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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