10385 COG2128Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
10385	chr_16a	COG2128	202400	203171	+	COG2128

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442508	Thaps10385.2, Thaps10385.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0381

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0273	0.40	0.4 55

Most Highly Correlated Transcripts

bd737 (bd737) NA 0.9168	2009 hypothetical protein 0.8908	264344 PDEase_I 0.8465	8849 U-box superfamily 0.8462	9255 hypothetical protein 0.8404	24039 hypothetical protein 0.8303
268329 Synaptobrevin 0.828	bd1801 (bd1801) NA 0.8252	21558 hypothetical protein 0.8252	bd1890 (bd1890) NA 0.8247

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG2128		Uncharacterized conserved protein [Function unknown]	-	57.9331	5.31E-11	93 - 209	multi-dom	225039

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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