Phatr_hclust_0003 Hierarchical Clustering
Phaeodactylum tricornutum
| Cluster Plot | Conditions Plot | Dendrogram |
|---|---|---|
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| GO ID | Go Term | p-value | q-value | Cluster |
|---|---|---|---|---|
| GO:0006555 | methionine metabolism | 0.00197506 | 1 | Phatr_hclust_0003 |
| GO:0006904 | vesicle docking during exocytosis | 0.0039472 | 1 | Phatr_hclust_0003 |
| GO:0016192 | vesicle-mediated transport | 0.0127857 | 1 | Phatr_hclust_0003 |
| GO:0006457 | protein folding | 0.110709 | 1 | Phatr_hclust_0003 |
|
PHATRDRAFT_10571 : cyclophilin b (cyclophilin superfamily) |
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PHATRDRAFT_29606 : major mitochondrialhas rnase and dna endo- and exonucleolytic activities has roles in mitochondrialapoptosis and maintenance of polyploidy (NUC superfamily) |
PHATRDRAFT_28431 : methylenetetrahydrofolate reductase (MTHFR) |
PHATRDRAFT_26375 : fructosamine kinase (Fructosamin_kin) |
PHATRDRAFT_42956 : viral a-type inclusion (Smc) |
|
PHATRDRAFT_46304 : cpne3l protein (C2B_Copine) |
PHATRDRAFT_11956 : sec1-like protein (Sec1) |
| Condition | Condition | Difference | FDR |
|---|---|---|---|
| Re-illuminated_6h | Re-illuminated_6h | -0.027 | 0.946778 |
| Copper_SH | Copper_SH | 0.249 | 0.0886691 |
| Green_vs_Red_24h | Green_vs_Red_24h | -0.071 | 0.68983 |
| Silver_SH | Silver_SH | -0.031 | 0.803404 |
| Cadmium_1.2mg | Cadmium_1.2mg | -0.020 | 0.908966 |
| BlueLight_24h | BlueLight_24h | -0.122 | 0.666854 |
| GreenLight_0.5h | GreenLight_0.5h | 0.275 | 0.668219 |
| RedLight_6h | RedLight_6h | -0.094 | 0.790138 |
| light_16hr_dark_7.5hr | light_16hr_dark_7.5hr | 0.000 | 1 |
| GreenLight_24h | GreenLight_24h | -0.184 | 0.340969 |
| light_6hr | light_6hr | -0.472 | 0.157348 |
| dark_8hr_light_3hr | dark_8hr_light_3hr | -0.363 | 0.231884 |
| Blue_vs_Green_6h | Blue_vs_Green_6h | -0.123 | 0.424769 |
| Ammonia_SH | Ammonia_SH | -0.438 | 0.281694 |
| Simazine_SH | Simazine_SH | 0.262 | 0.12392 |
| Oil_SH | Oil_SH | 0.227 | 0.138793 |
| Salinity_15ppt_SH | Salinity_15ppt_SH | 0.412 | 0.034264 |
| Cadmium_SH | Cadmium_SH | 0.033 | 0.83464 |
| Blue_vs_Red_24h | Blue_vs_Red_24h | -0.008 | 0.964444 |
| highlight_0to6h | highlight_0to6h | 0.110 | 0.666029 |
| BlueLight_0.5h | BlueLight_0.5h | -0.326 | 0.672494 |
| Dispersant_SH | Dispersant_SH | 0.252 | 0.103233 |
| light_16hr_dark_4hr | light_16hr_dark_4hr | 0.229 | 0.195785 |
| light_15.5hr | light_15.5hr | 0.301 | 0.42371 |
| light_10.5hr | light_10.5hr | -0.114 | 0.793418 |
| Dispersed_oil_SH | Dispersed_oil_SH | 0.176 | 0.228078 |
| Si_free | Si_free | -0.058 | 0.720685 |
| Re-illuminated_0.5h | Re-illuminated_0.5h | 0.151 | 0.860023 |
| Mixture_SH | Mixture_SH | -0.406 | 0.3275 |
| Blue_vs_Red_6h | Blue_vs_Red_6h | -0.203 | 0.514894 |
| light_16hr_dark_30min | light_16hr_dark_30min | 0.431 | 0.229241 |
| BlueLight_6h | BlueLight_6h | -0.296 | 0.20623 |
| highlight_12to48h | highlight_12to48h | 0.346 | 0.220117 |
| RedLight_24h | RedLight_24h | -0.114 | 0.643048 |
| Dark_treated | Dark_treated | 0.029 | 0.970523 |
| GreenLight_6h | GreenLight_6h | -0.173 | 0.513852 |
| Cadmium_0.12mg | Cadmium_0.12mg | -0.056 | 0.390271 |
| Blue_vs_Green_24h | Blue_vs_Green_24h | 0.063 | 0.603915 |
| RedLight_0.5h | RedLight_0.5h | 0.429 | 0.469169 |
| Green_vs_Red_6h | Green_vs_Red_6h | -0.079 | 0.81746 |
| Re-illuminated_24h | Re-illuminated_24h | 0.025 | 0.919789 |
