Phatr_hclust_0398 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

Members

PHATRDRAFT_47324 : lipopolysaccharide a protein (CAP10 superfamily)
PHATRDRAFT_44574 : asparagine-linked glycosylation 9 homolog (Glyco_transf_22 superfamily)
PHATRDRAFT_44091 :
PHATRDRAFT_31877 : (Clp_protease_like superfamily)
PHATRDRAFT_31431 : piggybac transposase uribo2 (DDE_Tnp_1_7 superfamily)
PHATRDRAFT_54879 :
PHATRDRAFT_34625 :
PHATRDRAFT_37300 : cellulosomal scaffoldin anchoring protein (DDE_Tnp_1_7 superfamily)
PHATRDRAFT_47022 :
PHATRDRAFT_42512 : (ARM)

Conditions

Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h 0.110 0.746226
Copper_SH Copper_SH -0.531 0.00277778
Green_vs_Red_24h Green_vs_Red_24h 0.003 0.989474
Silver_SH Silver_SH -0.846 0.000555556
Cadmium_1.2mg Cadmium_1.2mg 0.256 0.0191489
BlueLight_24h BlueLight_24h 0.072 0.817265
GreenLight_0.5h GreenLight_0.5h 0.382 0.519789
RedLight_6h RedLight_6h 0.043 0.905426
light_16hr_dark_7.5hr light_16hr_dark_7.5hr 0.000 1
GreenLight_24h GreenLight_24h 0.105 0.633333
light_6hr light_6hr 0.109 0.782353
dark_8hr_light_3hr dark_8hr_light_3hr 0.125 0.716829
Blue_vs_Green_6h Blue_vs_Green_6h -0.072 0.685974
Ammonia_SH Ammonia_SH 0.201 0.598004
Simazine_SH Simazine_SH -0.726 0.000423729
Oil_SH Oil_SH 0.338 0.0485981
Salinity_15ppt_SH Salinity_15ppt_SH -0.095 0.522976
Cadmium_SH Cadmium_SH 0.448 0.0226563
Blue_vs_Red_24h Blue_vs_Red_24h -0.030 0.900223
highlight_0to6h highlight_0to6h 0.064 0.838985
BlueLight_0.5h BlueLight_0.5h 0.883 0.188189
Dispersant_SH Dispersant_SH -0.127 0.380675
light_16hr_dark_4hr light_16hr_dark_4hr 0.022 0.911099
light_15.5hr light_15.5hr 0.064 0.869073
light_10.5hr light_10.5hr 0.105 0.808844
Dispersed_oil_SH Dispersed_oil_SH 0.407 0.0266871
Si_free Si_free 0.039 0.805402
Re-illuminated_0.5h Re-illuminated_0.5h 0.632 0.3367
Mixture_SH Mixture_SH 0.538 0.200875
Blue_vs_Red_6h Blue_vs_Red_6h -0.015 0.985113
light_16hr_dark_30min light_16hr_dark_30min -0.002 0.9958
BlueLight_6h BlueLight_6h 0.028 0.943298
highlight_12to48h highlight_12to48h 0.288 0.315331
RedLight_24h RedLight_24h 0.102 0.674936
Dark_treated Dark_treated 0.357 0.722886
GreenLight_6h GreenLight_6h 0.100 0.738876
Cadmium_0.12mg Cadmium_0.12mg 0.146 0.0177419
Blue_vs_Green_24h Blue_vs_Green_24h -0.033 0.816842
RedLight_0.5h RedLight_0.5h 0.225 0.749611
Green_vs_Red_6h Green_vs_Red_6h 0.056 0.866667
Re-illuminated_24h Re-illuminated_24h 0.069 0.772995

Motifs

MEME Output