21819 PX_SNX_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21819	chr_3	PX_SNX_like	1284385	1287036	+	PX_SNX_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451714	Thaps21819.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0431

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0035	0.44

Most Highly Correlated Transcripts

270222 0.952	13448 Sec1 0.8655	24491 hypothetical protein 0.8623	34191 CobN_like 0.843	263480 COG4770 0.8407	269874 PKc_like superfamily 0.8381
268640 Glyco_hydro_47 0.8364	21948 DUF179 0.8363	16295 FBPase 0.8349	2502 hypothetical protein 0.8348

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PX_SNX_like		The phosphoinositide binding Phox Homology domain of SNX-like proteins; The PX domain is a...	cl02563	191.48	4.00E-57	396 - 517	specific	132775
PX_domain superfamily		The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (...	-	191.48	4.00E-57	396 - 517	superfamily	261344

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45401	PHATRDRAFT_45401	278511	328891	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0007242 -

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