21951 Sterol-sensing superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21951	chr_3	Sterol-sensing superfamily	1903561	1906974	+	Sterol-sensing superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445355	Thaps21951.2, Thaps21951.3, Thaps21951.4, Thaps21951.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0326

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0189	0.32	0.44 280

Most Highly Correlated Transcripts

bd524 (bd524) NA 0.8727	6925 hypothetical protein 0.8685	bd381 (bd381) NA 0.8611	25330 hypothetical protein 0.8362	25873 hypothetical protein 0.8319	4919 hypothetical protein 0.8273
bd1877 (bd1877) NA 0.8127	11102 hypothetical protein 0.8117	24367 hypothetical protein 0.807	24999 hypothetical protein 0.8066

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sterol-sensing superfamily		Sterol-sensing domain of SREBP cleavage-activation; Sterol regulatory element-binding proteins (...	-	65.6881	2.89E-12	508 - 670	superfamily	256997

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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