22399 E_set_AMPKbeta_like_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22399 chr_4 E_set_AMPKbeta_like_N 1752980 1754103 - E_set_AMPKbeta_like_N

Synonyms

NCBI ID Ensembl Genomes exon ID
7451932 Thaps22399.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0466

Most Highly Correlated Transcripts

bd1893

(bd1893) NA
0.9339

16295

FBPase
0.931

bd463

(bd463) Aa_trans superfamily
0.9223

261400

NA
0.9127

264556

FBPase
0.9083

24525

hypothetical protein
0.8952

37970

Mito_carr
0.8917

13448

Sec1
0.8902

32782

MPN superfamily
0.886

22782

hypothetical protein
0.8839

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E_set_AMPKbeta_like_N N-terminal Early set domain, a glycogen binding domain, associated with the catalytic domain of AMP... cl09101 120.011 1.02E-33 115 - 192 specific 199889
E_set superfamily Early set domain associated with the catalytic domain of sugar utilizing enzymes at either the N or... - 120.011 1.02E-33 115 - 192 superfamily 263719
AMPKBI 5'-AMP-activated protein kinase beta subunit, interation domain; This region is found in... cl08426 91.6124 3.76E-23 264 - 324 specific 214973
AMPKBI superfamily 5'-AMP-activated protein kinase beta subunit, interation domain; This region is found in... - 91.6124 3.76E-23 264 - 324 superfamily 263647

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46289 PHATRDRAFT_46289 208153 164049 357467 Cre10.g457500.t1.1 AT4G16360.3 561976

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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