22430 SOULThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
22430	chr_4	SOUL	1946187	1947065	-	SOUL

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451969	Thaps22430.2, Thaps22430.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0122

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0103	0.42	29 19

Most Highly Correlated Transcripts

bd1841 (bd1841) CAP10 superfamily 0.9406	bd415 (bd415) arom_aa_hydroxylase superfamily 0.9257	23779 hypothetical protein 0.9058	21720 hypothetical protein 0.8939	17242 SPFH_like_u4 0.8933	bd410 (bd410) HNHc 0.8866
bd1840 (bd1840) NA 0.8852	3906 Mito_carr 0.882	23047 hypothetical protein 0.8786	263178 (HCD1) NADB_Rossmann superfamily 0.8753

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	138.928	7.92E-41	9 - 197	superfamily	252825
SOUL superfamily		SOUL heme-binding protein; This family represents a group of putative heme-binding proteins. Our...	-	138.928	7.92E-41	9 - 197	superfamily	252825

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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