22454 (Tp_HSF_4.7b) HSF_DNA-bind
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22454 chr_4 (Tp_HSF_4.7b) HSF_DNA-bind 2064213 2065813 - HSF_DNA-bind
NCBI ID Ensembl Genomes exon ID
7451370 Thaps22454.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0498
Normalized Mean Residue
Thaps_bicluster_0017
0.42
(bd885) NA
0.9308
(bd1954) NA
0.8202
(bd1841) CAP10 superfamily
0.8164
(bd415) arom_aa_hydroxylase superfamily
0.8156
(bd1934) NA
0.8113
hypothetical protein
0.8038
(bd1692) NA
0.8032
(bd1840) NA
0.7919
(bd1890) NA
0.7912
hypothetical protein
0.7892
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF_DNA-bind HSF-type DNA-binding; HSF-type DNA-binding. cl12113 99.1114 3.01E-25 110 - 206 specific 249865
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 99.1114 3.01E-25 110 - 206 superfamily 264552
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_49596 PHATRDRAFT_49596 210108 262798 Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0003700 GO:0005634 GO:0006355 GO:0003677 -

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF
Log in to post comments