10750 MDR8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10750 chr_17 MDR8 607738 609845 + MDR8

Synonyms

NCBI ID Ensembl Genomes exon ID
7442158 Thaps10750.1, Thaps10750.2, Thaps10750.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0094

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0043
 0.36

Most Highly Correlated Transcripts

bd856

(bd856) NA
0.9547

3882

hypothetical protein
0.9468

21016

hypothetical protein
0.9354

1594

hypothetical protein
0.932

4705

hypothetical protein
0.9287

23263

hypothetical protein
0.9279

262708

TPR
0.9269

6536

hypothetical protein
0.9252

7236

hypothetical protein
0.9246

6626

hypothetical protein
0.9245

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family; This... cl16912 405.879 8.31E-137 284 - 622 specific 176234
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 405.879 8.31E-137 284 - 622 superfamily 266485
AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] - 93.4211 6.28E-21 287 - 612 multi-dom 223992

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016491 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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