24127 TIGR00238 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24127 chr_10 TIGR00238 superfamily 265796 267990 - TIGR00238 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447030 Thaps24127.1, Thaps24127.4, Thaps24127.3, Thaps24127.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0287

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

bd1095

(bd1095) NA
0.864

bd1094

(bd1094) FH2 superfamily
0.8145

bd622

(bd622) NA
0.8088

bd1081

(bd1081) NA
0.7914

bd1214

(bd1214) KISc_C_terminal
0.7907

bd846

(bd846) NA
0.7905

5920

NA
0.7888

270249

(NTT3) hypothetical protein
0.7835

bd258

(bd258) HU
0.7817

bd765

(bd765) NA
0.7613

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TIGR00238 superfamily KamA family protein; This model represents essentially the whole of E. coli YjeK and of some of its... - 124.948 4.36E-32 122 - 447 superfamily 265681

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34965 PHATRDRAFT_34965 223177 240854 469785 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003824 GO:0005506 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0005506

iron ion binding

Details: 
Interacting selectively and non-covalently with iron (Fe) ions.
GO Category: 
MF

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