24171 COP-gamma_platf superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24171 chr_10 COP-gamma_platf superfamily 495168 499618 - COP-gamma_platf superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451104 Thaps24171.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0366

Most Highly Correlated Transcripts

22764

hypothetical protein
0.8583

269314

SMK-1 superfamily
0.8549

20828

hypothetical protein
0.8322

8762

SNF2_N
0.8231

10490

hypothetical protein
0.8182

21530

hypothetical protein
0.8171

269718

sucA
0.8168

22918

hypothetical protein
0.8158

268118

WD40
0.8157

12836

EEP superfamily
0.8146

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COP-gamma_platf superfamily Coatomer gamma subunit appendage platform subdomain; COPI-coated vesicles function in retrograde... - 71.8277 4.12E-14 1303 - 1454 superfamily 255017

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46588 PHATRDRAFT_46588 251665 197519 Not available Not available Not available 331721

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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