24480 ECM4Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24480	chr_12	ECM4	460555	461647	-	ECM4

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445818	Thaps24480.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0028	0.44

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9847	26991 GRX_GRXh_1_2_like 0.9296	3661 MMCE 0.9094	21887 hypothetical protein 0.9071	26769 ERG4_ERG24 superfamily 0.8996	9115 DnaJ 0.8939
9274 hypothetical protein 0.8932	7469 hypothetical protein 0.8914	263836 Ggt 0.888	37934 GRX_PICOT_like 0.8855

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GST_C_family superfamily		C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase...	-	74.9179	1.64E-16	192 - 304	superfamily	261442
ECM4		Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	-	110.5	1.10E-27	29 - 303	multi-dom	223512

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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