25074 Beta_propelThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25074	chr_15	Beta_propel	828481	831480	-	Beta_propel

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443983	Thaps25074.1, Thaps25074.3, Thaps25074.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0332

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0093	0.41	0.084 1.8

Most Highly Correlated Transcripts

bd833 (bd833) NA 0.8611	5779 hypothetical protein 0.8498	992 hypothetical protein 0.8403	11360 hypothetical protein 0.8385	586 PTZ00018 0.8292	21085 hypothetical protein 0.8259
2959 hypothetical protein 0.8234	5777 PRO8NT 0.8179	21559 hypothetical protein 0.8147	bd735 (bd735) NA 0.8144

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Beta_propel		Beta propeller domain; Members of this family comprise secreted bacterial proteins containing C-...	-	111.614	6.62E-26	310 - 885	multi-dom	255588

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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