25422 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25422 chr_18 hypothetical protein 701816 704458 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7450892 Thaps25422.3, Thaps25422.1, Thaps25422.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0485

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0085
 0.45

Most Highly Correlated Transcripts

bd739

(bd739) NA
0.8836

bd1802

(bd1802) NA
0.8784

bd1891

(bd1891) COG3899
0.869

bd1749

(bd1749) NA
0.8596

261895

GH18_chitinase-like superfamily
0.8549

23694

hypothetical protein
0.832

25553

hypothetical protein
0.8293

3936

MFS_1
0.8145

24631

hypothetical protein
0.8071

23215

Ubox
0.7989

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36572 Not available 168694 317559 435339 Cre01.g003200.t1.2 Not available 496155

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005576 GO:0006030 GO:0008061 -

GO:0005576

extracellular region

Details: 
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO Category: 
CC

GO:0006030

chitin metabolic process

Details: 
The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO Category: 
BP

GO:0008061

chitin binding

Details: 
Interacting selectively and non-covalently with chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.
GO Category: 
MF

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