260936 HCO3_cotransp superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260936 chr_1 HCO3_cotransp superfamily 1418940 1420038 + HCO3_cotransp superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps260936.2, Thaps260936.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0025

Most Highly Correlated Transcripts

270240

hypothetical protein
1

36656

DUF4336
0.8892

19311

Lumazine_synthase-I
0.8872

1082

hypothetical protein
0.886

25834

hypothetical protein
0.8825

9964

hypothetical protein
0.8785

6062

hypothetical protein
0.8757

268146

hypothetical protein
0.8692

8509

hypothetical protein
0.8686

7546

COG1505
0.8639

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HCO3_cotransp superfamily HCO3- transporter family; This family contains Band 3 anion exchange proteins that exchange CL-/... - 217.164 9.22E-66 80 - 305 superfamily 250251

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45656 PHATRDRAFT_45656 146888 231532 210210 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005452 GO:0006820 GO:0016020 GO:0015380 GO:0016021 -

GO:0005452

inorganic anion exchanger activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: inorganic anion A(out) + inorganic anion B(in) = inorganic anion A(in) + inorganic anion B(out).
GO Category: 
MF

GO:0006820

anion transport

Details: 
The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0015380

NA

Details: 
NA
GO Category: 
NA

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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