261036 PLN03150Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261036	chr_1	PLN03150	1918821	1919431	+	PLN03150

Synonyms

NCBI ID	Ensembl Genomes exon ID
7443145	Thaps261036.2, Thaps261036.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0092

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0212	0.16	18 86000

Most Highly Correlated Transcripts

bd1173 (bd1173) S_TKc 0.9771	3482 hypothetical protein 0.9767	1305 hypothetical protein 0.9738	1201 hypothetical protein 0.9719	10180 hypothetical protein 0.9719	1055 hypothetical protein 0.9691
6774 hypothetical protein 0.9678	36911 Rhomboid 0.967	10654 hypothetical protein 0.966	7236 hypothetical protein 0.9637

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN03150		hypothetical protein; Provisional	-	69.0742	3.03E-14	46 - 146	multi-dom	178695

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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