11098 GH99_GH71_like_2Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11098	chr_19a_19	GH99_GH71_like_2	129861	131642	+	GH99_GH71_like_2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446266	Thaps11098.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0126

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0146	0.45	0.005 0.09

Most Highly Correlated Transcripts

37497 cysE 0.9337	41655 Chloroa_b-bind 0.895	264598 AAA 0.8889	7536 hypothetical protein 0.885	5993 hypothetical protein 0.8792	30701 PRK05279 0.8753
261278 GRX_GRXh_1_2_like 0.8719	260866 (ORC2) ORC2 superfamily 0.8711	6960 Methyltransf_31 0.8695	31751 PKCI_related 0.8686

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GH99_GH71_like_2		Uncharacterized glycoside hydrolase family 99-like domain; This family of putative glycoside...	cl01529	477.133	1.80E-164	178 - 582	specific	211417
GH99_GH71_like superfamily		Glycoside hydrolase families 71, 99, and related domains; This superfamily of glycoside hydrolases...	-	477.133	1.80E-164	178 - 582	superfamily	260982

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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