261186 PLPDE_III superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261186 chr_2 PLPDE_III superfamily 107453 108954 + PLPDE_III superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445160 Thaps261186.1, Thaps261186.3, Thaps261186.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0298

Most Highly Correlated Transcripts

21090

hypothetical protein
0.8767

5698

Rad17
0.8717

10490

hypothetical protein
0.8656

12836

EEP superfamily
0.8583

10405

hypothetical protein
0.8517

40200

TRX_reduct
0.8507

22928

hypothetical protein
0.8491

11461

hypothetical protein
0.8482

23560

hypothetical protein
0.8475

24604

hypothetical protein
0.8444

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLPDE_III superfamily Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes; The fold type III PLP-dependent enzyme... - 331.99 5.00E-110 6 - 421 superfamily 260308
COG3616 Predicted amino acid aldolase or racemase [Amino acid transport and metabolism] - 162.578 1.64E-45 4 - 415 multi-dom 226143

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 42598 Not available Not available 484736

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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