262855 TLDc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262855 chr_6 TLDc 926786 930607 + TLDc

Synonyms

NCBI ID Ensembl Genomes exon ID
7445942 Thaps262855.2, Thaps262855.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0483

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0124
 0.37

Most Highly Correlated Transcripts

bd739

(bd739) NA
0.8775

bd1802

(bd1802) NA
0.8658

bd1803

(bd1803) NA
0.8601

bd1891

(bd1891) COG3899
0.8598

22783

CRCB
0.8583

bd945

(bd945) COG3899
0.8481

bd954

(bd954) NA
0.8481

bd740

(bd740) NA
0.8305

23962

hypothetical protein
0.8216

bd1749

(bd1749) NA
0.8148

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TLDc domain in TBC and LysM domain containing proteins; domain in TBC and LysM domain containing... cl02144 119.734 2.20E-30 1031 - 1216 specific 214733
TLD superfamily TLD; This domain is predicted to be an enzyme and is often found associated with pfam01476. It&... - 119.734 2.20E-30 1031 - 1216 superfamily 261195

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_33623 PHATR_33623 200759 319032 Not available Cre10.g439550.t1.1 Not available 486204

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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