262949 LRR_RI superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262949 chr_6 LRR_RI superfamily 1335700 1336273 - LRR_RI superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442717 Thaps262949.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0293

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0016
 0.55

Most Highly Correlated Transcripts

bd1749

(bd1749) NA
0.8437

bd1803

(bd1803) NA
0.8277

bd739

(bd739) NA
0.8105

bd1891

(bd1891) COG3899
0.8023

bd1802

(bd1802) NA
0.7983

4372

hypothetical protein
0.7819

bd1487

(bd1487) PLN02688
0.7711

bd740

(bd740) NA
0.7643

4108

hypothetical protein
0.7103

7334

hypothetical protein
0.7056

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LRR_RI superfamily Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue... - 64.6841 5.50E-13 1 - 153 superfamily 238064

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre03.g154300.t1.1 Not available 313495

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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