263061 Sod_Fe_N superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263061 chr_7 Sod_Fe_N superfamily 206640 207007 - Sod_Fe_N superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446610 Thaps263061.2, Thaps263061.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0071
 0.35

Most Highly Correlated Transcripts

bd951

(bd951) NA
0.8892

20405

GRX_GRXh_1_2_like
0.8808

5957

hypothetical protein
0.8655

6594

hypothetical protein
0.863

2678

Rotamase
0.8562

3322

hypothetical protein
0.8521

7160

hypothetical protein
0.8485

264628

UxaC
0.8469

263800

Zip superfamily
0.8464

36669

TPT
0.8464

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sod_Fe_N superfamily Iron/manganese superoxide dismutases, alpha-hairpin domain; superoxide dismutases (SODs) catalyse... - 69.623 5.09E-17 1 - 85 superfamily 249570

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004784 GO:0006801 GO:0046872 -

GO:0004784

superoxide dismutase activity

Details: 
Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.
GO Category: 
MF

GO:0006801

superoxide metabolic process

Details: 
The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.
GO Category: 
BP

GO:0046872

metal ion binding

Details: 
Interacting selectively and non-covalently with any metal ion.
GO Category: 
MF

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