263313 Peptidase_M8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263313 chr_7 Peptidase_M8 superfamily 1898356 1901087 + Peptidase_M8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450616 Thaps263313.3, Thaps263313.2, Thaps263313.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0391

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0042
 0.43

Most Highly Correlated Transcripts

2145

hypothetical protein
0.8954

21795

SCP superfamily
0.8784

261820

PKc_like superfamily
0.8724

25451

AAA superfamily
0.8687

bd833

(bd833) NA
0.8674

263142

FtsJ
0.8655

22967

PH-like superfamily
0.8638

25678

hypothetical protein
0.8557

12836

EEP superfamily
0.8526

8287

hypothetical protein
0.8523

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M8 superfamily Leishmanolysin; Leishmanolysin. - 171.898 4.51E-46 312 - 677 superfamily 267835

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42588 PHATRDRAFT_42588 212563 254485 455768 Not available AT5G42620.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0007155 GO:0016020 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0007155

cell adhesion

Details: 
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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