264188 COG1026
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264188 chr_14 COG1026 652380 656287 + COG1026

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0227

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0179
 0.28

Most Highly Correlated Transcripts

25486

PseudoU_synth_RluCD_like
0.8664

22685

COG2520
0.856

6606

obgE
0.8559

263669

UvrD
0.8509

36339

(ITS1) PLN02882
0.8487

27997

(DAD1) PRK00911
0.8375

24015

Urb2 superfamily
0.8351

10053

hypothetical protein
0.8333

4038

hypothetical protein
0.8332

2128

hypothetical protein
0.8313

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 80.2126 7.81E-17 225 - 404 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 80.2126 7.81E-17 225 - 404 superfamily 253075
COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] - 358.188 2.22E-106 36 - 1013 multi-dom 223957

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 248346 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

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