268147 Trp_Tyr_perm superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268147 chr_2 Trp_Tyr_perm superfamily 16941 18249 - Trp_Tyr_perm superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452145 Thaps268147.1, Thaps268147.3, Thaps268147.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0413

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0029
 0.39

Most Highly Correlated Transcripts

37497

cysE
0.8812

41655

Chloroa_b-bind
0.87

36995

LplA
0.8676

35136

NA
0.8665

36525

PRK09427
0.8649

38707

Aldolase_Class_I superfamily
0.8628

30701

PRK05279
0.8603

36764

PRK05279
0.8586

36007

Aldolase_II superfamily
0.8567

39941

PRK13357
0.8511

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Trp_Tyr_perm superfamily Tryptophan/tyrosine permease family; Tryptophan/tyrosine permease family. - 114.69 6.73E-29 1 - 312 superfamily 266625

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_36976 PHATR_36976 184376 188974 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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