268718 (ANS1) PLN02549
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268718 chr_4 (ANS1) PLN02549 1462962 1465184 + PLN02549

Synonyms

NCBI ID Ensembl Genomes exon ID
7448834 Thaps268718.3, Thaps268718.1, Thaps268718.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0060

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0088
 0.37

Most Highly Correlated Transcripts

bd258

(bd258) HU
0.9292

bd1652

(bd1652) ABC_ATPase superfamily
0.8891

ThpsCp081

(secA) preprotein translocase subunit SecA
0.8889

ThpsCp135

(secA) preprotein translocase subunit SecA
0.867

ThpsCp028

(rpl11) ribosomal protein L11
0.8633

264556

FBPase
0.8576

bd1095

(bd1095) NA
0.8547

ThpsCp025

(rpl20) ribosomal protein L20
0.8545

ThpsCp029

(rpl1) ribosomal protein L1
0.8539

bd1092

(bd1092) NA
0.8482

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal... cl00292 242.71 3.22E-75 231 - 471 specific 238949
AANH_like superfamily Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases... - 242.71 3.22E-75 231 - 471 superfamily 260331
AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B... cl00319 217.04 3.90E-66 2 - 207 specific 238364
Gn_AT_II superfamily Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen... - 217.04 3.90E-66 2 - 207 superfamily 260351
PLN02549 asparagine synthase (glutamine-hydrolyzing) - 986.954 0 1 - 590 multi-dom 178164

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18337 PHATRDRAFT_18337 255185 240002 66467 Cre01.g004300.t1.2 AT3G47340.2 330563

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0004066 GO:0006529 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0004066

asparagine synthase (glutamine-hydrolyzing) activity

Details: 
Catalysis of the reaction: ATP + L-aspartate + L-glutamine = AMP + diphosphate + L-asparagine + L-glutamate.
GO Category: 
MF

GO:0006529

asparagine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.
GO Category: 
BP

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