269341 SGS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269341 chr_8 SGS 385032 386436 + SGS

Synonyms

NCBI ID Ensembl Genomes exon ID
7445563 Thaps269341.1, Thaps269341.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9908

13448

Sec1
0.8849

7696

2_5_RNA_ligase2
0.8781

22871

hypothetical protein
0.8762

2124

Pan_kinase superfamily
0.8751

269593

(RPT4) RPT1
0.8686

8841

P4Hc
0.8677

5519

hypothetical protein
0.8661

2409

MPN_NPL4
0.8646

2328

hypothetical protein
0.8612

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog... cl00175 61.9189 1.76E-12 119 - 201 specific 107220
alpha-crystallin-Hsps_p23-like superfamily alpha-crystallin domain (ACD) found in alpha-crystallin-type small heat shock proteins, and a... - 61.9189 1.76E-12 119 - 201 superfamily 260235
SGS superfamily SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found in... - 100.171 1.95E-26 228 - 310 superfamily 252936
SGS superfamily SGS domain; This domain was thought to be unique to the SGT1-like proteins, but is also found in... - 100.171 1.95E-26 228 - 310 superfamily 252936

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11363 PHATRDRAFT_11363 150833 243577 449829 Cre12.g513600.t1.2 AT4G23570.2 498024

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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