269975 (Tp_TAZ2) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269975 chr_19a_19 (Tp_TAZ2) regulator [Rayko] 124211 125907 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7446265 Thaps269975.2, Thaps269975.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0223

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0226
 0.29

Most Highly Correlated Transcripts

bd1807

(bd1807) RRS1 superfamily
0.9362

25120

U3_assoc_6 superfamily
0.8899

23209

hypothetical protein
0.8817

261145

Lactamase_B superfamily
0.879

268417

hypothetical protein
0.8771

32158

NOC3
0.8734

22441

hypothetical protein
0.8726

18198

RRM_NIFK_like
0.8688

28300

dimethyladenosine transferase
0.8648

5104

hypothetical protein
0.8599

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44807 PHATRDRAFT_44807 248363 252538 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003712 GO:0005634 GO:0006355 -

GO:0003712

transcription cofactor activity

Details: 
Interacting selectively and non-covalently with a regulatory transcription factor and also with the basal transcription machinery in order to modulate transcription. Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between regulatory transcription factors and the basal transcription machinery.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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