27208 CCC1_like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
27208	chr_2	CCC1_like superfamily	1920751	1922246	+	CCC1_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452475	Thaps27208.5, Thaps27208.3, Thaps27208.2, Thaps27208.4, Thaps27208.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0288

Most Highly Correlated Transcripts

268443 SAICAR_synt_Sc 0.9269	21723 DnaJ 0.903	36007 Aldolase_II superfamily 0.899	35136 NA 0.8913	32894 Ribosomal_L13 0.8904	32216 (RT5) rpsE_bact 0.8895
20893 hypothetical protein 0.8892	3904 DUF3611 superfamily 0.8888	23550 hypothetical protein 0.888	25040 NA 0.8843

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CCC1_like superfamily		CCC1-related family of proteins; CCC1_like: This protein family includes the proteins related to...	-	216.062	3.25E-69	48 - 272	superfamily	260320

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_26157	PHATRDRAFT_26157	160408	249559	216904	Not available	AT2G01770.1	304534

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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