27852 cyclophilin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
27852 chr_4 cyclophilin superfamily 944158 944770 - cyclophilin superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453354 Thaps27852.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0329

Most Highly Correlated Transcripts

19158

GRX_PICOT_like
0.9248

bd739

(bd739) NA
0.9194

bd1802

(bd1802) NA
0.9183

2073

hypothetical protein
0.9078

7336

hypothetical protein
0.8905

36995

LplA
0.8904

21598

hypothetical protein
0.8887

1676

hypothetical protein
0.8881

7335

hypothetical protein
0.8879

27773

CAP_ED
0.8798

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 195.939 1.91E-63 1 - 194 superfamily 260252

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11169 PHATRDRAFT_11169 200530 189300 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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