2846 FDH_GDH_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2846 chr_2 FDH_GDH_like superfamily 1999415 2000552 + FDH_GDH_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7452491 Thaps2846.2, Thaps2846.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0102
 0.20

Most Highly Correlated Transcripts

270281

hypothetical protein
0.9326

5077

PLN00015
0.9303

2465

hypothetical protein
0.9225

32431

Fe_bilin_red superfamily
0.9202

3327

hypothetical protein
0.9183

3884

hypothetical protein
0.9173

3622

CDP-ME_synthetase
0.9141

283

FHIT
0.9135

37534

MRP-like
0.9109

1989

FKBP_C
0.9108

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FDH_GDH_like superfamily Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related... - 289.352 8.16E-96 29 - 331 superfamily 266580
LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme... - 234.819 2.09E-74 31 - 340 multi-dom 223980

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_34672 PHATRDRAFT_34672 267482 23925 Not available Cre01.g019100.t1.2 Not available 340288

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006564 GO:0016616 GO:0004617 -

GO:0006564

L-serine biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of L-serine, the L-enantiomer of serine, i.e. (2S)-2-amino-3-hydroxypropanoic acid.
GO Category: 
BP

GO:0016616

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO Category: 
MF

GO:0004617

phosphoglycerate dehydrogenase activity

Details: 
Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+.
GO Category: 
MF

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